COGNITION: Genomics-Guided Precision Oncology in Early High-Risk Breast Cancer

Trial statusRecruiting
Trial phaseNot listed
Trial typeObservational
Biological sexAll
Age18-80
SponsorGerman Cancer Research Center

About this trial

The COGNITION diagnostic platform elucidates the biomarker profile of neoadjuvant chemotherapy-resistant residual bulk tumors in high risk early breast cancer patients. The major goal is to provide a framework for genomic profiling, which serves as infrastructure for systematic biomarker-screening and -stratification for concise therapy-arm allocation in the interventional clinical phase II trial COGNITION-GUIDE (NCT05332561).

In patients, who display a poor response to standard-of-care neoadjuvant chemotherapy, tissue samples before and after neoadjuvant therapy are subjected together with blood samples to comprehensive genomic profiling to identify patients potentially benefiting from biomarker-guided interventions in COGNITION-GUIDE.

Samples not required for standard-of-care clinical procedures or genomic profiling are systematically collected in a dedicated bio-repository to fuel translational scientific companion programs. The continuously growing comprehensive database serves as an integrative resource for systematic, prospective multidimensional data collection (clinical records, biomaterial, genomic data).

In summary, the overarching goal is to generate a precision oncology platform i) to identify clinically-actionable biomarkers and drug targets that drive genomics-guided therapies and ii) to couple the observational, diagnostic registry platform to the independent, biomarker-stratified clinical therapy trial COGNITION-GUIDE.

Eligibility criteria

This trial does not accept healthy volunteers

Qualifiers

Female and male breast cancer patients aged ≥18 years.

Patients with primary early breast cancer (irrespective of subtypes) or - as an exception - patients with isolated loco-regional relapses that can be treated with a curative intention

Option A: patients planned to receive neoadjuvant chemotherapy are enrolled before starting the neoadjuvant treatment

Option B: patients with clinical non-complete response can be enrolled after the last cycle of neoadjuvant chemotherapy before surgery Note: Option A/B are strongly preferred entry time-points

Disqualifiers

Patients who did not sign or withdrew the informed consent form (ICF).

Inability to retrieve tissue for molecular profiling Any physical or mental handicap or severe comorbidities that would hamper the adequate cooperation with the patient.

Trial population

High-risk early-stage breast cancer (eBC) with suspected (non-clinical Complete Response - non-cCR ) and/or proven (non-pathological Complete Response - non-pCR) poor response towards NACT (irrespective of subtype).

Trial design

Design model

Cohort

Time perspective

Prospective

Treatments tested in this trial

  • Genomic Profiling / Sequencing

    Other intervention

    Procedure: genomic profiling (Whole-Genome- / Exome-Sequencing + RNA-Sequencing) in high-risk early breast cancer patients pre- and post neoadjuvant therapy

Treatment groups

No treatment groups listed

Trial outcomes

Primary outcomes

1

Comprehensive assessment of clinical patient data, collection of biomaterial and implementation of genomics- / molecular- and immune- guided precision medicine in eBC into the clinics.

• Total number/percentage of patients with eBC and high risk for relapse i) eligible for genomic profiling, ii) successfully genomically-profiled tumours, iii) with conclusive biomarker profiles.

Time frame
31/12/2028
2

Setting up a clinical and multidimensional, molecular diagnostic registry platform for patients with eBC and high risk for relapse.

• To record, show and benchmark the reality of high-throughput genomics-based medical care provided to patients with eBC and general outcome of patients (in terms of overall survival (OS), invasive disease-free survival (IDFS), distant disease-free survival (DDFS).

Time frame
31/12/2028
3

Assessment of feasibility and retrieval of the logistical, clinical and information basis to screen and enroll patients for independent molecular-driven intervention trials (independent of this registry, e.g. COGNITION-GUIDE).

• Total number/percentage of patients enrolled in subsequent interventional trials.

Time frame
31/12/2028

Secondary outcomes

1

Identification and characterization of prognostic and predictive biomarkers, drug targets, resistance mechanisms and the immune environment.

• Generation of catalogues of molecular aberrations, prognostic and predictive biomarkers and association between specific biomarkers and response to standard-of care treatment and/or targeted treatment for eBC (outside COGNITION) measured as OS, IDFS and DDFS.

Time frame
31/12/2028
2

Monitoring of treatment response and elucidation of resistance mechanisms using liquid biopsies.

• Association between the detection of circulating tumour cells (CTCs), circulating tumour DNA (ctDNA) and outcome measured as OS, IDFS and DDFS.

Time frame
31/12/2028
3

Ex vivo cultivation of patient-derived biomaterial for research purposes.

* Evaluation of the suitability of ex vivo model systems and liquid biopsy approaches (e.g. CTCs, ctDNA) to capture tumour heterogeneity, tumour-microenvironment interactions and drug response. * Characterization and modeling of the immune-compartment in tumour specimens and ex vivo culture approaches (immunoprofiling).

Time frame
31/12/2028
4

Delineation of tumour-microenvironment interactions with the immune systems.

• Descriptive assessment of the impact of germline alterations on drug-response and toxicity (pharmacogenomics) by generation of a comprehensive catalogue of alterations in conjunction with administered therapies and toxicities.

Time frame
31/12/2028

Other outcomes

Sponsors and contacts

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German Cancer Research Center

Lead sponsor

University Hospital Heidelberg

Collaborator

German Federal Ministry of Education and Research

Collaborator